femparm.h File Reference
Contains declarations for class APOLparm. More...
#include "maloc/maloc.h"#include "apbs/vhal.h"#include "apbs/vstring.h"
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Data Structures | |
| struct | sFEMparm |
| Parameter structure for FEM-specific variables from input files. More... | |
Typedefs | |
| typedef enum eFEMparm_EtolType | FEMparm_EtolType |
| Declare FEparm_EtolType type. | |
| typedef enum eFEMparm_EstType | FEMparm_EstType |
| Declare FEMparm_EstType type. | |
| typedef enum eFEMparm_CalcType | FEMparm_CalcType |
| Declare FEMparm_CalcType type. | |
| typedef struct sFEMparm | FEMparm |
| Declaration of the FEMparm class as the FEMparm structure. | |
Enumerations | |
| enum | eFEMparm_EtolType { FET_SIMP = 0, FET_GLOB = 1, FET_FRAC = 2 } |
Adaptive refinment error estimate tolerance key. More... | |
| enum | eFEMparm_EstType { FRT_UNIF = 0, FRT_GEOM = 1, FRT_RESI = 2, FRT_DUAL = 3, FRT_LOCA = 4 } |
Adaptive refinment error estimator method. More... | |
| enum | eFEMparm_CalcType { FCT_MANUAL, FCT_NONE } |
Calculation type. More... | |
Functions | |
| FEMparm * | FEMparm_ctor (FEMparm_CalcType type) |
| Construct FEMparm. | |
| int | FEMparm_ctor2 (FEMparm *thee, FEMparm_CalcType type) |
| FORTRAN stub to construct FEMparm. | |
| void | FEMparm_dtor (FEMparm **thee) |
| Object destructor. | |
| void | FEMparm_dtor2 (FEMparm *thee) |
| FORTRAN stub for object destructor. | |
| int | FEMparm_check (FEMparm *thee) |
| Consistency check for parameter values stored in object. | |
| void | FEMparm_copy (FEMparm *thee, FEMparm *source) |
| Copy target object into thee. | |
| Vrc_Codes | FEMparm_parseToken (FEMparm *thee, char tok[VMAX_BUFSIZE], Vio *sock) |
| Parse an MG keyword from an input file. | |
Detailed Description
Contains declarations for class APOLparm.
Contains declarations for class FEMparm.
- Version:
- Id
- apolparm.h 1350 2009-02-12 00:38:48Z yhuang01
- Attention:
* * APBS -- Adaptive Poisson-Boltzmann Solver * * Nathan A. Baker (baker@biochem.wustl.edu) * Dept. of Biochemistry and Molecular Biophysics * Center for Computational Biology * Washington University in St. Louis * * Additional contributing authors listed in the code documentation. * * Copyright (c) 2002-2009, Washington University in St. Louis. * Portions Copyright (c) 2002-2009. Nathan A. Baker * Portions Copyright (c) 1999-2002. The Regents of the University of California. * Portions Copyright (c) 1995. Michael Holst * * All rights reserved. * * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: * * - Redistributions of source code must retain the above copyright notice, this * list of conditions and the following disclaimer. * * - Redistributions in binary form must reproduce the above copyright notice, * this list of conditions and the following disclaimer in the documentation * and/or other materials provided with the distribution. * * - Neither the name of Washington University in St. Louis nor the names of its * contributors may be used to endorse or promote products derived from this * software without specific prior written permission. * * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS * "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT * LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR * A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR * CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, * EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, * PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR * PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF * LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING * NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS * SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. * *
- Version:
- Id
- femparm.h 1350 2009-02-12 00:38:48Z yhuang01
- Attention:
* * APBS -- Adaptive Poisson-Boltzmann Solver * * Nathan A. Baker (baker@biochem.wustl.edu) * Dept. of Biochemistry and Molecular Biophysics * Center for Computational Biology * Washington University in St. Louis * * Additional contributing authors listed in the code documentation. * * Copyright (c) 2002-2009, Washington University in St. Louis. * Portions Copyright (c) 2002-2009. Nathan A. Baker * Portions Copyright (c) 1999-2002. The Regents of the University of California. * Portions Copyright (c) 1995. Michael Holst * * All rights reserved. * * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: * * - Redistributions of source code must retain the above copyright notice, this * list of conditions and the following disclaimer. * * - Redistributions in binary form must reproduce the above copyright notice, * this list of conditions and the following disclaimer in the documentation * and/or other materials provided with the distribution. * * - Neither the name of Washington University in St. Louis nor the names of its * contributors may be used to endorse or promote products derived from this * software without specific prior written permission. * * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS * "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT * LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR * A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR * CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, * EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, * PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR * PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF * LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING * NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS * SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. * *
