valist.c File Reference

Class Valist methods. More...

#include "apbscfg.h"
#include "apbs/valist.h"
Include dependency graph for valist.c:

Functions

VPUBLIC double Valist_getCenterX (Valist *thee)
 Get x-coordinate of molecule center.
VPUBLIC double Valist_getCenterY (Valist *thee)
 Get y-coordinate of molecule center.
VPUBLIC double Valist_getCenterZ (Valist *thee)
 Get z-coordinate of molecule center.
VPUBLIC VatomValist_getAtomList (Valist *thee)
 Get actual array of atom objects from the list.
VPUBLIC int Valist_getNumberAtoms (Valist *thee)
 Get number of atoms in the list.
VPUBLIC VatomValist_getAtom (Valist *thee, int i)
 Get pointer to particular atom in list.
VPUBLIC unsigned long int Valist_memChk (Valist *thee)
 Get total memory allocated for this object and its members.
VPUBLIC ValistValist_ctor ()
 Construct the atom list object.
VPUBLIC Vrc_Codes Valist_ctor2 (Valist *thee)
 FORTRAN stub to construct the atom list object.
VPUBLIC void Valist_dtor (Valist **thee)
 Destroys atom list object.
VPUBLIC void Valist_dtor2 (Valist *thee)
 FORTRAN stub to destroy atom list object.
VPUBLIC Vrc_Codes Valist_readPDB (Valist *thee, Vparam *param, Vio *sock)
 Fill atom list with information from a PDB file.
VPUBLIC Vrc_Codes Valist_readPQR (Valist *thee, Vparam *params, Vio *sock)
 Fill atom list with information from a PQR file.
VPUBLIC Vrc_Codes Valist_readXML (Valist *thee, Vparam *params, Vio *sock)
 Fill atom list with information from an XML file.
VPUBLIC Vrc_Codes Valist_getStatistics (Valist *thee)
 Load up Valist with various statistics.

Detailed Description

Class Valist methods.

Author:
Nathan Baker
Version:
Id
valist.c 1393 2009-08-26 16:00:23Z yhuang01
Attention:
 *
 * APBS -- Adaptive Poisson-Boltzmann Solver
 *
 * Nathan A. Baker (baker@biochem.wustl.edu)
 * Dept. of Biochemistry and Molecular Biophysics
 * Center for Computational Biology
 * Washington University in St. Louis
 *
 * Additional contributing authors listed in the code documentation.
 *
 * Copyright (c) 2002-2009, Washington University in St. Louis.
 * Portions Copyright (c) 2002-2009.  Nathan A. Baker
 * Portions Copyright (c) 1999-2002.  The Regents of the University of California.
 * Portions Copyright (c) 1995.  Michael Holst
 *
 * All rights reserved.
 * 
 * Redistribution and use in source and binary forms, with or without
 * modification, are permitted provided that the following conditions are met: 
 *
 * -  Redistributions of source code must retain the above copyright notice, this
 * list of conditions and the following disclaimer.  
 * 
 * - Redistributions in binary form must reproduce the above copyright notice,
 * this list of conditions and the following disclaimer in the documentation
 * and/or other materials provided with the distribution.
 * 
 * - Neither the name of Washington University in St. Louis nor the names of its
 * contributors may be used to endorse or promote products derived from this
 * software without specific prior written permission.
 * 
 * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
 * "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
 * LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
 * A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR
 * CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
 * EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
 * PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
 * PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
 * LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
 * NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
 * SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 *
 * 

Generated by  doxygen 1.6.2